Madden 07 franchise has lots of customization.  I created a video for the subscribers that created teams for the upcoming MFL Madden 07 franchise.

On offense, you can choose how often your team runs the football vs passing and you can split the offensive snaps between RB1/RB2.  On defense, you can adjust the play calling to play more against the run or pass and you can choose how aggressive you want your team to play.